Publications,References

The genome sequence of the marsh skullcap, Scutellaria galericulata L.
Published: February, 2023

Abstract: We present a genome assembly from an individual Scutellaria galericulata (the marsh skullcap; Streptophyta; Magnoliopsida; Lamiales; Lamiaceae). Th... Read more »

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The genome sequence of the Marmalade Hoverfly, Episyrphus balteatus...
Published: February, 2023

Abstract: We present a genome assembly from an individual female Episyrphus balteatus (the Marmalade Hoverfly; Arthropoda; Insecta; Diptera; Syrphidae). The ... Read more »

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The genome sequence of the crab hacker barnacle, Sacculina carcini ...
Published: February, 2023

Abstract: We present a genome assembly from an individual female Sacculina carcini (crab hacker barnacle; Arthropoda; Crustacea; Thecostraca; Sacculinidae). ... Read more »

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Phased nanopore assembly with Shasta and modular graph phasing with...
Published: February, 2023

Abstract: As a step towards simplifying and reducing the cost of haplotype resolved de novo assembly, we describe new methods for accurately phasing nanopore... Read more »

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MYC-driven increases in mitochondrial DNA copy number occur early a...
Published: February, 2023

Abstract: Increased mitochondrial function may render some cancers vulnerable to mitochondrial inhibitors. Since mitochondrial function is regulated partly b... Read more »

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The genome sequence of the black needle fly, Leuctra nigra (Olivier...
Published: February, 2023

Abstract: We present a genome assembly from an individual male Leuctra nigra (black needle fly; Arthropoda; Insecta; Plecoptera; Leuctridae). The genome sequ... Read more »

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DNA methylation aberrancy is a reliable prognostic tool in uveal me...
Published: February, 2023

Abstract: Despite outstanding advances in understanding the genetic background of uveal melanoma (UM) development and prognosis, the role of DNA methylation ... Read more »

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Infinium Human MethylationEPIC Array Service

Gene body DNA hydroxymethylation restricts the magnitude oftranscri...
Published: February, 2023

Abstract: DNA hydroxymethylation (5hmC) is the most abundant oxidative derivative of DNA methylation (5mC) and is typically enriched at enhancers and gene bo... Read more »

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The genome sequence of the Riband Wave, Idaea aversata (Linnaeus, 1...
Published: January, 2023

Abstract: We present a genome assembly from an individual male Idaea aversata (the Riband Wave; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome se... Read more »

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The genome sequence of the Brick, Agrochola circellaris (Hufnagel, ...
Published: January, 2023

Abstract: We present a genome assembly from an individual male Agrochola circellaris (the Brick; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome seq... Read more »

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The genome of Roselle's flesh fly Sarcophaga (Helicophagella) rosel...
Published: January, 2023

Abstract: We present a genome assembly from an individual male Sarcophaga rosellei (Roselle's flesh fly; Arthropoda; Insecta; Diptera; Sarcophagidae). The ge... Read more »

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The mineralocorticoid receptor modulates timing and location of gen...
Published: January, 2023

Abstract: Glucocorticoids (GCs) exert potent antiproliferative and anti-inflammatory properties, explaining their therapeutic efficacy for skin diseases. GCs... Read more »

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iDeal ChIP-seq Kit for Transcription Factors

The genome sequence of the common green furrow bee, Lasioglossum mo...
Published: January, 2023

Abstract: We present a genome assembly from an individual male Lasioglossum morio (the common green furrow bee; Arthropoda; Insecta; Hymenoptera; Halictidae)... Read more »

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The genome sequence of a caddisfly, Limnephilus lunatus (Curtis, 1834)
Published: January, 2023

Abstract: We present a genome assembly from an individual Limnephilus lunatus (a caddisfly; Arthropoda; Insecta; Trichoptera; Limnephilidae). The genome sequ... Read more »

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The genome sequence of an erect bryozoan, Bugulina stolonifera (Ryl...
Published: January, 2023

Abstract: We present a genome assembly from a Bugulina stolonifera colony (an erect bryozoan; Bryozoa; Gymnolaemata; Cheilostomatida; Bugulidae). The genome ... Read more »

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The genome sequence of the Dimorphic Bear Hoverfly, Criorhina berbe...
Published: January, 2023

Abstract: We present a genome assembly from an individual female Criorhina berberina (the Dimorphic Bear Hoverfly; Arthropoda; Insecta; Diptera; Syrphidae). ... Read more »

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Mechanisms and function of de novo DNA methylation in placentaldeve...
Published: January, 2023

Abstract: DNA methylation is a repressive epigenetic modification that is essential for development, exemplified by the embryonic and perinatal lethality obs... Read more »

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Microplex Library Preparation kit

Neonatal inflammation increases hippocampal KCC2 expression through...
Published: January, 2023

Abstract: The mechanisms by which neonatal inflammation leads to cognitive deficits in adulthood remain poorly understood. Inhibitory GABAergic synaptic tran... Read more »

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MagMeDIP kit hMeDIP

Epigenomic charting and functional annotation of risk loci in renal...
Published: January, 2023

Abstract: While the mutational and transcriptional landscapes of renal cell carcinoma (RCC) are well-known, the epigenome is poorly understood. We characteri... Read more »

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Genome assembly of the hybrid grapevine Vitis ‘Chambourcin’
Published: January, 2023

Abstract: Background ‘Chambourcin’ is a French-American interspecific hybrid grape variety grown in the eastern and midwestern United States and used for mak... Read more »

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The genome sequence of a snail-killing fly, Pherbina coryleti (Scop...
Published: January, 2023

Abstract: We present a genome assembly from an individual male Pherbina coryleti (snail-killing fly; Arthropoda; Insecta; Diptera; Sciomyzidae). The genome s... Read more »

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The genome sequence of the Pied Smudge, Ypsolopha sequella (Clerck,...
Published: January, 2023

Abstract: We present a genome assembly from an individual Ypsolopha sequella (the Pied Smudge; Arthropoda; Insecta; Lepidoptera; Ypsolophidae). The genome se... Read more »

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The genome sequence of the segmented worm, Sthenelais limicola (Ehl...
Published: January, 2023

Abstract: We present a genome assembly from an individual Sthenelais limicola (the segmented worm; Annelida; Polychaeta; Phyllodocida; Sigalionidae). The gen... Read more »

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The genome sequence of the sea mat, Membranipora membranacea (Linna...
Published: January, 2023

Abstract: We present a genome assembly from an adult colony of Membranipora membranacea (the sea mat; Bryozoa; Gymnolaemata; Cheilostomatida; Membraniporidae... Read more »

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Auxin-inducible degron 2 system deciphers functions of CTCF domains...
Published: January, 2023

Abstract: BACKGROUND: CTCF is a well-established chromatin architectural protein that also plays various roles in transcriptional regulation. While CTCF biol... Read more »

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Whole-genome analysis of gamma-aminobutyric acid producing Psychobi...
Published: January, 2023

Abstract: The gamma amino butyric acid (GABA) is a chemical messenger and is essential for the health of the brain and muscles. Some lactic acid bacteria (LA... Read more »

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Genomes of endangered great hammerhead and shortfin mako sharks rev...
Published: January, 2023

Abstract: Despite increasing threats of extinction to Elasmobranchii (sharks and rays), whole genome-based conservation insights are lacking. Here, we presen... Read more »

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Development of DNA methylation-based epigenetic age predictors inlo...
Published: January, 2023

Abstract: Biological ageing is connected to life history variation across ecological scales and informs a basic understanding of age-related declines in orga... Read more »

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Methyltransferase Inhibition Enables Tgf Driven Induction of and i...
Published: January, 2023

Abstract: deletion or silencing is common across human cancer, reinforcing the general importance of bypassing its tumor suppression in cancer formation or p... Read more »

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Antibody CRISPR

Analyzing the Genome-Wide Distribution of Histone Marks byCUT\&Tag ...
Published: January, 2023

Abstract: CUT&Tag is a method to map the genome-wide distribution of histone modifications and some chromatin-associated proteins. CUT&Tag relies on ... Read more »

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