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Publications

Explore Diagenode’s publication database. Learn how our products are used in diverse fields of research.

Dynamic CCAAT/Enhancer Binding Protein-Associated Changes of DNA Me...
Published: November, 2013
Abstract: DNA methylation patterns are maintained in adult somatic cells. Recent findings, however, suggest that all methylation patterns are not preserved. ... Read more »
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Antibody LowCell ChIP kit
Coupling transcription factor occupancy to nucleosome architecture ...
Published: November, 2013
Abstract: It is currently not possible to resolve the genome-wide relationship of transcription factors (TFs) and nucleosomes at the level of individual chro... Read more »
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Bioruptor Chromatin Shearing ChIP-seq
Histone deacetylase 3 coordinates commensal-bacteria-dependent inte...
Published: November, 2013
Abstract: The development and severity of inflammatory bowel diseases and other chronic inflammatory conditions can be influenced by host genetic and environ... Read more »
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Bioruptor Chromatin Shearing ChIP-seq
Precision-cut liver slices of Atlantic cod (Gadus morhua): An in vi...
Published: November, 2013
Abstract: The Atlantic cod (Gadus morhua) is an economically important species commonly consumed by humans. The widespread distribution of cod in the North A... Read more »
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Bioruptor Tissue Homogenization Bioruptor Plus
Pattern of heat shock factor and heat shock protein expression in l...
Published: November, 2013
Abstract: Bipolar disorder (BD), a stress-related disease, is characterized by altered glucocorticoid receptor (GR) signalling. Stress response includes acti... Read more »
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Antibody
Promiscuous RNA binding by Polycomb repressive complex 2.
Published: November, 2013
Abstract: Polycomb repressive complex 2 (PRC2) is a histone methyltransferase required for epigenetic silencing during development and cancer. Long noncoding... Read more »
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Bioruptor Chromatin Shearing ChIP-seq
MEF2 Is a Converging Hub for Histone Deacetylase 4 and Phosphatidyl...
Published: November, 2013
Abstract: The MEF2-class IIa histone deacetylase (HDAC) axis operates in several differentiation pathways and in numerous adaptive responses. We show here th... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Regulation of hypothalamic corticotropin-releasing hormone transcri...
Published: November, 2013
Abstract: Negative glucocorticoid feedback is essential for preventing the deleterious effects of excessive hypothalamic pituitary adrenal axis axis activati... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Genomic and proteomic analyses of prdm5 reveal interactions with in...
Published: November, 2013
Abstract: PRDM proteins belong to the SET domain protein family, which is involved in the regulation of gene expression. Although few PRDM members possess hi... Read more »
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Bioruptor Chromatin Shearing ChIP-seq Bioruptor Plus
A chromatin immunoprecipitation (ChIP) protocol for use in whole hu...
Published: November, 2013
Abstract: Chromatin immunoprecipitation (ChIP) has become a central method when studying in vivo protein-DNA interactions, with the major challenge being the... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR Bioruptor Plus
Expression and regulation of intergenic long noncoding RNAs during ...
Published: November, 2013
Abstract: Although intergenic long noncoding RNAs (lincRNAs) have been linked to gene regulation in various tissues, little is known about lincRNA transcript... Read more »
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DNA shearing Bioruptor
Lipopolysaccharide Increases the Incidence of Collagen-Induced Arth...
Published: November, 2013
Abstract: OBJECTIVE: The protease HTRA-1 is closely associated with rheumatoid arthritis (RA). The molecular mechanisms that control HTRA-1 expression are cu... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
PRC2 binds active promoters and contacts nascent RNAs in embryonic ...
Published: November, 2013
Abstract: EZH2 is the catalytic subunit of PRC2, a central epigenetic repressor essential for development processes in vivo and for the differentiation of em... Read more »
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Bioruptor Chromatin Shearing ChIP-seq
Live visualization of chromatin dynamics with fluorescent TALEs.
Published: November, 2013
Abstract: The spatiotemporal organization of genomes in the nucleus is an emerging key player to regulate genome function. Live imaging of nuclear organizati... Read more »
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Antibody
Mitochondrial-related proteomic changes during obesity and fasting ...
Published: November, 2013
Abstract: Although mitochondrial dysfunction is implicated in the pathogenesis of obesity, the molecular mechanisms underlying obesity-related metabolic abno... Read more »
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Bioruptor
The long noncoding RNA SChLAP1 promotes aggressive prostate cancer ...
Published: November, 2013
Abstract: Prostate cancers remain indolent in the majority of individuals but behave aggressively in a minority. The molecular basis for this clinical hetero... Read more »
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Bioruptor Chromatin Shearing
Dynamics of 1α,25-dihydroxyvitamin D3-dependent chromatin accessibi...
Published: November, 2013
Abstract: The signaling cascade of the transcription factor vitamin D receptor (VDR) is triggered by its specific ligand 1α,25-dihydroxyvitamin D3 (1α,25(OH)... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR Bioruptor Plus
Mouse BAZ1A (ACF1) is dispensable for double-strand break repair bu...
Published: November, 2013
Abstract: ATP-dependent chromatin remodelers control DNA access for transcription, recombination, and other processes. Acf1 (also known as BAZ1A in mammals) ... Read more »
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Bioruptor Cell Lysis Western Blot
Interplay between active chromatin marks and RNA-directed DNA methy...
Published: November, 2013
Abstract: DNA methylation is an epigenetic mark that is associated with transcriptional repression of transposable elements and protein-coding genes. Convers... Read more »
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Antibody H3K4me3 (C15410003)
The THO complex component Thp2 counteracts telomeric R-loops and te...
Published: October, 2013
Abstract: Telomere maintenance by the conventional DNA replication machinery and telomerase is assisted by specialized DNA helicases, nucleases and telomere ... Read more »
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DNA shearing Bioruptor Chromatin Shearing ChIP-qPCR
Ten-Eleven Translocation-2 (TET2) Is a Master Regulator of Smooth M...
Published: October, 2013
Abstract: BACKGROUND: Smooth muscle cells (SMCs) are remarkably plastic. Their reversible differentiation is required for growth and wound healing but also ... Read more »
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MethylCap
Ligation bias in illumina next-generation DNA libraries: implicatio...
Published: October, 2013
Abstract: Ancient DNA extracts consist of a mixture of endogenous molecules and contaminant DNA templates, often originating from environmental microbes. The... Read more »
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DNA shearing Bioruptor
Fine-Mapping an Association of FSHR with Preterm Birth in a Finnish...
Published: October, 2013
Abstract: Preterm birth is a complex disorder defined by gestations of less than 37 weeks. While preterm birth is estimated to have a significant genetic com... Read more »
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DNA shearing Bioruptor
Diet Alters Both the Structure and Taxonomy of the Ovine Gut Microb...
Published: October, 2013
Abstract: We surveyed the ruminal metagenomes of 16 sheep under two different diets using Illumina pair-end DNA sequencing of raw microbial DNA extracted fro... Read more »
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DNA shearing Bioruptor
Mu-seq: Sequence-Based Mapping and Identification of Transposon Ind...
Published: October, 2013
Abstract: Mutations tagged by transposon insertions can be readily mapped and identified in organisms with sequenced genomes. Collections of such mutants all... Read more »
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DNA shearing Bioruptor
Identification of genes expressed by immune cells of the colon that...
Published: October, 2013
Abstract: A locus on human chromosome 11q23 tagged by marker rs3802842 was associated with colorectal cancer (CRC) in a genome-wide association study; this f... Read more »
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DNA shearing Bioruptor
A missense mutation accelerating the gating of the lysosomal Cl-/H+...
Published: October, 2013
Abstract: Chloride/proton exchange by the lysosomal anion transporter ClC-7/Ostm1 is of pivotal importance for the physiology of lysosomes and bone resorptio... Read more »
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DNA shearing Bioruptor
A molecular evolution approach to study the roles of tropomyosin in...
Published: October, 2013
Abstract: Tropomyosin, a coiled-coil protein that binds along the length of the actin filament, is a universal regulator of the actin cytoskeleton. We have t... Read more »
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Bioruptor
The double PHD finger domain of MOZ/MYST3 induces α-helical structu...
Published: October, 2013
Abstract: Histone tail modifications control many nuclear processes by dictating the dynamic exchange of regulatory proteins on chromatin. Here we report nov... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
A functionally conserved Polycomb response element from mouse HoxD ...
Published: October, 2013
Abstract: Anterior-posterior body axis in all bilaterians is determined by the Hox gene clusters that are activated in a spatio-temporal order. This expressi... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR

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