Publications,References

Transcriptional activation by the thyroid hormone receptor through ...
Published: April, 2015

Abstract: A bimodal switch model is widely used to describe transcriptional regulation by the thyroid hormone receptor (TR). In this model, the unliganded TR... Read more »

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Bioruptor Chromatin Shearing ChIP-seq

Spt6 Is Essential for rRNA Synthesis by RNA Polymerase I
Published: April, 2015

Abstract: Spt6 has many roles in transcription initiation and elongation by RNA polymerase (Pol) II. These effects are mediated through interactions with his... Read more »

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Bioruptor Chromatin Shearing

Suppression of Interferon β gene transcription by inhibitors of Bro...
Published: April, 2015

Abstract: Polo-Like Kinase (PLK) inhibitors, such as BI-2536, have been reported to suppress interferon β (IFNβ) gene transcription induced by ligands that a... Read more »

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Bioruptor Chromatin Shearing

RAR/RXR binding dynamics distinguish pluripotency from differentiat...
Published: April, 2015

Abstract: In mouse embryonic cells, ligand-activated retinoic acid receptors (RARs) play a key role in inhibiting pluripotency-maintaining genes and activati... Read more »

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Bioruptor Chromatin Shearing ChIP-seq

Intrinsic retroviral reactivation in human preimplantation embryos ...
Published: April, 2015

Abstract: Endogenous retroviruses (ERVs) are remnants of ancient retroviral infections, and comprise nearly 8% of the human genome. The most recently acquire... Read more »

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Bioruptor Chromatin Shearing

Opposite expression of CYP51A1 and its natural antisense transcript...
Published: April, 2015

Abstract: Cytochrome P450 family member CYP51A1 is a key enzyme in cholesterol biosynthesis whose deregulation is implicated in numerous diseases, including ... Read more »

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Antibody H3K4me3 (C15410003)

Deciphering the role of Polycomb Repressive Complex 1 (PRC1) varian...
Published: April, 2015

Abstract: Polycomb Group (PcG) proteins play important roles in regulating developmental phase transitions in plants; however, little is known about the role... Read more »

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Antibody H3K27me3 (C15410069)

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-...
Published: April, 2015

Abstract: Upland cotton is a model for polyploid crop domestication and transgenic improvement. Here we sequenced the allotetraploid Gossypium hirsutum L. ac... Read more »

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DNA shearing Bioruptor

The chromatin Remodeler CHD8 is required for activation of progeste...
Published: April, 2015

Abstract: While the importance of gene enhancers in transcriptional regulation is well established, the mechanisms and the protein factors that determine enh... Read more »

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Bioruptor Chromatin Shearing ChIP-seq

Loss of TET2 in hematopoietic cells leads to DNA hypermethylation o...
Published: April, 2015

Abstract: DNA methylation is tightly regulated throughout mammalian development, and altered DNA methylation patterns are a general hallmark of cancer. The m... Read more »

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Antibody

Genome-Wide Analysis of Phosphorylated PhoP Binding to Chromosomal ...
Published: April, 2015

Abstract: UNLABELLED: The PhoPR two-component signal transduction system controls one of three responses activated by Bacillus subtilis to adapt to phosphate... Read more »

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Bioruptor Chromatin Shearing

High-throughput and quantitative assessment of enhancer activity in...
Published: April, 2015

Abstract: Cell-type specific regulation of gene expression requires the activation of promoters by distal genomic elements defined as enhancers. The identifi... Read more »

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DNA shearing Bioruptor

Transcriptional co-repressor function of the hippo pathway transduc...
Published: April, 2015

Abstract: YAP (yes-associated protein) and TAZ are oncogenic transcriptional co-activators downstream of the Hippo tumor-suppressor pathway. However, whether... Read more »

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Bioruptor Chromatin Shearing

DNA methylation and gene expression profiles show novel regulatory ...
Published: April, 2015

Abstract: BACKGROUND: Alcohol is a well-known risk factor for hepatocellular carcinoma (HCC), but the mechanisms underlying the alcohol-related hepatocarcino... Read more »

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MeDIP kit

Clustering of mammalian Hox genes with other H3K27me3 targets withi...
Published: April, 2015

Abstract: Embryogenesis requires the precise activation and repression of many transcriptional regulators. The Polycomb group proteins and the associated H3K... Read more »

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Bioruptor Chromatin Shearing ChIP-seq

DNA methylation and histone modifications regulate SOX11 expression...
Published: April, 2015

Abstract: BACKGROUND: The neural transcription factor SOX11 is present at specific stages during embryo development with a very restricted expression in adul... Read more »

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HighCell ChIP kit

Divergent androgen regulation of unfolded protein response pathways...
Published: April, 2015

Abstract: The unfolded protein response (UPR) is a homeostatic mechanism to maintain endoplasmic reticulum (ER) function. The UPR is activated by various phy... Read more »

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Bioruptor Chromatin Shearing

Oct3/4 directly regulates expression of E2F3a in mouse embryonic st...
Published: April, 2015

Abstract: Embryonic stem (ES) cells, derived from the inner cell mass of blastocysts, have a characteristic cell cycle with truncated G1 and G2 phases. Recen... Read more »

Impact of oxidative stress defense on bacterial survival and morpho...
Published: April, 2015

Abstract: Campylobacter jejuni, a microaerophilic foodborne pathogen, inescapably faces high oxygen tension during its transmission to humans. Thus, the abil... Read more »

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Bioruptor Cell Lysis Western Blot

The Paf1 complex represses small-RNA-mediated epigenetic gene silen...
Published: April, 2015

Abstract: RNA interference (RNAi) refers to the ability of exogenously introduced double-stranded RNA to silence expression of homologous sequences. Silencin... Read more »

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Bioruptor Chromatin Shearing

Draft genome sequences of 26 porphyromonas strains isolated from th...
Published: April, 2015

Abstract: We present the draft genome sequences for 26 strains of Porphyromonas (P. canoris, P. gulae, P. cangingavalis, P. macacae, and 7 unidentified) and ... Read more »

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DNA shearing Bioruptor

A cohesin-OCT4 complex mediates Sox enhancers to prime an early emb...
Published: April, 2015

Abstract: Short- and long-scales intra- and inter-chromosomal interactions are linked to gene transcription, but the molecular events underlying these struct... Read more »

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Antibody H3K4me3 (C15410003) H3K27me3 (C15410195)

Characterization of the transcriptome of nascent hair cells and ide...
Published: April, 2015

Abstract: Hair cells are sensory receptors for the auditory and vestibular system in vertebrates. The transcription factor Atoh1 is both necessary and suffic... Read more »

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Bioruptor Chromatin Shearing

Quantitative analysis of the TNF-α-induced phosphoproteome reveals ...
Published: April, 2015

Abstract: The inhibitor of the nuclear factor-κB (IκB) kinase (IKK) complex is a key regulator of the canonical NF-κB signalling cascade and is crucial for f... Read more »

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Bioruptor Chromatin Shearing

Release of human cytomegalovirus from latency by a KAP1/TRIM28 phos...
Published: April, 2015

Abstract: Human cytomegalovirus (HCMV) is a highly prevalent pathogen that induces life-long infections notably through the establishment of latency in hemat... Read more »

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Antibody

Zinc regulates a switch between primary and alternative S18 ribosom...
Published: April, 2015

Abstract: The Mycobacterium tuberculosis genome encodes five putative 'alternative' ribosomal proteins whose expression is repressed at high Zn(2+) concentra... Read more »

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Bioruptor Cell Lysis

An automated method for efficient, accurate and reproducible constr...
Published: April, 2015

Abstract: BACKGROUND: Integration of RNA-seq expression data with knowledge on chromatin accessibility, histone modifications, DNA methylation, and transcrip... Read more »

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IP-Star IP-Star Compact

Phylogenomic analysis shows that Bacillus amyloliquefaciens subsp p...
Published: April, 2015

Abstract: The rhizosphere isolated bacteria belonging to the Bacillus amyloliquefaciens subsp. plantarum and Bacillus methylotrophicus clades are an importan... Read more »

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DNA shearing Bioruptor

Long-lasting pro-inflammatory suppression of microglia by LPS-preco...
Published: April, 2015

Abstract: Microglia, the innate immune cells of the central nervous system (CNS), react to endotoxins like bacterial lipopolysaccharides (LPS) with a pronoun... Read more »

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Bioruptor Chromatin Shearing

A Role for the Serine/Arginine-Rich (SR) Protein B52/SRSF6 in Cell ...
Published: April, 2015

Abstract: Serine-/arginine-rich (SR) proteins are RNA-binding proteins that are primarily involved in alternative splicing. Expression of some SR proteins is... Read more »

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Bioruptor Chromatin Shearing

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