Publications,References

Target Capture and Massively Parallel Sequencing of Ultraconserved ...
Published: September, 2013

Abstract: Comparative genetic studies of non-model organisms are transforming rapidly due to major advances in sequencing technology. A limiting factor in th... Read more »

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Bioruptor

Direct activation of a mouse Hoxd11 axial expression enhancer by Gd...
Published: September, 2013

Abstract: A Hoxd11/lacZ reporter, expressed with a Hoxd11-like axial expression pattern in transgenic mouse embryos, is stimulated in tailbud fragments when ... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

Proteomics identifies ubiquitin-proteasome targets and new roles fo...
Published: September, 2013

Abstract: In order to identify new regulators of the phosphate (Pi) starvation signaling pathway in plants, we analyzed variation in the abundance of nuclear... Read more »

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Bioruptor

Exome sequencing identifies recurring FLT3 N676K mutations in core-...
Published: September, 2013

Abstract: The t(8;21) and inv(16)/t(16;16) rearrangements affecting the core-binding factors RUNX1 and CBFB, respectively, are found in 15% to 20% of adult d... Read more »

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DNA shearing Bioruptor

Insights into the Loblolly Pine Genome: Characterization of BAC and...
Published: September, 2013

Abstract: Despite their prevalence and importance, the genome sequences of loblolly pine, Norway spruce, and white spruce, three ecologically and economicall... Read more »

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DNA shearing Bioruptor

Evidence from mouse and man for a role of neuregulin 3 in nicotine ...
Published: September, 2013

Abstract: Addiction to nicotine and the ability to quit smoking are influenced by genetic factors. We used functional genomic approaches (chromatin immunopre... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

The p130 Isoform of Angiomotin Is Required for Yap-Mediated Hepatic...
Published: September, 2013

Abstract: The Hippo-Yap signaling pathway regulates a number of developmental and adult cellular processes, including cell fate determination, tissue growth,... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

Global alterations of DNA methylation in cholangiocarcinoma targets...
Published: September, 2013

Abstract: The molecular mechanisms underlying the genesis of cholangiocarcinomas (CCs) are poorly understood. Epigenetic changes such as aberrant hypermethyl... Read more »

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DNA shearing Bioruptor IP-Star Bioruptor Plus

Farnesoid X receptor directly regulates xenobiotic detoxification g...
Published: September, 2013

Abstract: Activation of xenobiotic metabolism pathways has been linked to lifespan extension in different models of aging. However, the mechanisms underlying... Read more »

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Chromatin Shearing ChIP-qPCR

Antisense transcripts enhanced by camptothecin at divergent CpG-isl...
Published: September, 2013

Abstract: DNA Topoisomerase I (Top1) is required to relax DNA supercoils generated by RNA polymerases (RNAPs). Top1 is inhibited with high specificity by cam... Read more »

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DNA shearing Bioruptor

Phosphorylation of RNA polymerase II is independent of P-TEFb in th...
Published: September, 2013

Abstract: RNA polymerase II (Pol II) elongation in metazoans is thought to require phosphorylation of serine 2 (Ser2-P) of the Pol II C-terminal domain (CTD)... Read more »

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Bioruptor Western Blot Tissue Homogenization

A new strategy for gene targeting and functional proteomics using t...
Published: September, 2013

Abstract: DT40 cells derived from chicken B lymphocytes exhibit exceptionally high homologous recombination rates. Therefore, they can be used as a convenien... Read more »

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Bioruptor Cell Lysis Western Blot

Integrated virus-host methylome analysis in head and neck squamous ...
Published: September, 2013

Abstract: One in six cancers worldwide is caused by infection and human papillomavirus (HPV) is one of the main culprits. To better understand the dynamics o... Read more »

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DNA shearing Bioruptor IP-Star

Chromatin-specific regulation of mammalian rDNA transcription by cl...
Published: September, 2013

Abstract: Enhancers and promoters often contain multiple binding sites for the same transcription factor, suggesting that homotypic clustering of binding sit... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of...
Published: September, 2013

Abstract: Argonaute proteins are often credited for their cytoplasmic activities in which they function as central mediators of the RNAi platform and microRN... Read more »

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Bioruptor Chromatin Shearing ChIP-seq

Unisexual and heterosexual meiotic reproduction generate aneuploidy...
Published: September, 2013

Abstract: Aneuploidy is known to be deleterious and underlies several common human diseases, including cancer and genetic disorders such as trisomy 21 in Dow... Read more »

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DNA shearing Bioruptor

Histone deacetylase complex1 expression level titrates plant growth...
Published: September, 2013

Abstract: Histone deacetylation regulates gene expression during plant stress responses and is therefore an interesting target for epigenetic manipulation of... Read more »

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Antibody

miR-1/133a clusters cooperatively specify the cardiomyogenic lineag...
Published: September, 2013

Abstract: miRNAs are small RNAs directing many developmental processes by posttranscriptional regulation of protein-coding genes. We uncovered a new role for... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR Antibody

A metagenomic snapshot of taxonomic and functional diversity in an ...
Published: September, 2013

Abstract: Cryoconite is a microbe–mineral aggregate which darkens the ice surface of glaciers. Microbial process and marker gene PCR-dependent measurements r... Read more »

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DNA shearing Bioruptor

Epigenetic silencing of Bim transcription by Spi-1/PU.1 promotes ap...
Published: September, 2013

Abstract: Deregulation of transcriptional networks contributes to haematopoietic malignancies. The transcription factor Spi-1/PU.1 is a master regulator of h... Read more »

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DNA shearing Bioruptor MeDIP kit

Mass production of SNP markers in a nonmodel passerine bird through...
Published: September, 2013

Abstract: Here, we present an adaptation of restriction-site-associated DNA sequencing (RAD-seq) to the Illumina HiSeq2000 technology that we used to produce... Read more »

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DNA shearing Bioruptor

Let-7b and miR-495 Stimulate Differentiation and Prevent Metaplasia...
Published: September, 2013

Abstract: BACKGROUND & AIMS: Diseases of the exocrine pancreas are often associated with perturbed differentiation of acinar cells. MicroRNAs (miRNAs) regula... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

The ASAP2 gene is a primary target of 1,25-dihydroxyvitamin D3 in h...
Published: August, 2013

Abstract: A genome-wide data set on vitamin D receptor (VDR) binding sites in human THP-1 cells (monocytes) led us to the genomic region around the ASAP2 (Ar... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR Bioruptor Plus

Long range epigenetic silencing is a trans-species mechanism that r...
Published: August, 2013

Abstract: DNA methylation and chromatin remodeling are frequently implicated in the silencing of genes involved in carcinogenesis. Long Range Epigenetic Sile... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR Antibody LowCell ChIP kit

Endogenous Nuclear RNAi Mediates Behavioral Adaptation to Odor.
Published: August, 2013

Abstract: Most eukaryotic cells express small regulatory RNAs. The purpose of one class, the somatic endogenous siRNAs (endo-siRNAs), remains unclear. Here, ... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

Transcriptional environment and chromatin architecture interplay di...
Published: August, 2013

Abstract: To explore the response of β globin locus with established chromatin domains upon their exposure to new transcriptional environments, we transferre... Read more »

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Bioruptor Chromatin Shearing ChIP-seq

PRC2 Controls Drosophila Oocyte Cell Fate by Repressing Cell Cycle ...
Published: August, 2013

Abstract: The oocyte is a unique cell type that undergoes extensive chromosome changes on its way to fertilization, but the chromatin determinants of its fat... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

Proteomics Strategies to Identify SUMO Targets and Acceptor Sites: ...
Published: August, 2013

Abstract: SUMOylation is a protein posttranslational modification that participates in the regulation of numerous biological processes within the cells. Smal... Read more »

A signature motif mediating selective interactions of BCL11A with t...
Published: August, 2013

Abstract: Despite their physiological importance, selective interactions between nuclear receptors (NRs) and their cofactors are poorly understood. Here, we ... Read more »

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Bioruptor Chromatin Shearing ChIP-qPCR

Enhanced Chromatin Dynamics by FACT Promotes Transcriptional Restar...
Published: August, 2013

Abstract: Chromatin remodeling is tightly linked to all DNA-transacting activities. To study chromatin remodeling during DNA repair, we established quantitat... Read more »

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Bioruptor Chromatin Shearing

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